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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936375.1_cds_XP_016481983.1_73260
CDS Infomation

[gene=LOC107802917] [db_xref=GeneID:107802917] [protein=E3 ubiquitin-protein ligase SDIR1-like] [protein_id=XP_016481983.1] [location=complement(join(54462..54581,55063..55188,56357..56402,57020..57134,57261..57489,57604..57656,57743..57797,57918..57995))] [gbkey=CDS]
Sequence

ATGAGTTTTGTTTTCCGAGGCACTAGAGCAGATATAGAACCTGGTTTTCCAGGATTGATC
CCCGAGCGCCGTGCAGTGCGAGTCCATGCAGCCCGGCCGGTTAATACTAACTCACTAGCT
TTTCTTGTCACGGTGCTCTTGCTGTTCATGATTCTGAACTCTCATCAAATGTCACCCAAT
TTTCTGCTGTGGTTGGTGCTCGGTGTCTTCTTTATGGCAACGACCCTTAGGATGTATGCA
ACGTGTCAGCAGCTTCAAGCCCAGGCACAAGCTCATGCTGTTGCTGCCAGTGGCCTTCTT
GGTCCTACAGAGTTGCGGCTACATATGCCCCCATCTATAGCACTTGCAACCAGAGGACGG
TTGCGAGGGCTCAGACTACAGCTTGCACTTCTTGACAGGGAGTTTGATGACTTAGATTAC
GAAACATTGAGGGCACTGGATAATGATGATGTTCCTACAACACCATCAATGACCGAGGAA
GAGATAAATGCTCTTCCTGTTCACAAGTACAAGGTTTCTGGACCCCAAAGTGCTGGTTCA
TCAACACACCCGGCATCTTCTTCAGGGTCCATTGAGAAGAAGCAAGAACCTGCAACTGCT
GTAGGAGCTACAAAGAACCCTGATGACGAACTAACTTGCAGTGTCTGCTTGGAGCAAGTC
AATGCTGGGGAACTTGTTCGCAGCTTGCCTTGCTTACATCAGTTCCATGCAAACTGCATT
GACCCATGGCTAAGGCAGCGGGGAACTTGCCCTGTCTGCAAATTTAGGGCCGGGTGGGAT
GAGAATGGACAAGGAGAAGTTGATGCTTATGATATGGTGTAG

Peptide Sequence

PEP ID

XP_016481983.1
PEP Infomation

PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Nicotiana tabacum]
Sequence

MSFVFRGTRADIEPGFPGLIPERRAVRVHAARPVNTNSLAFLVTVLLLFMILNSHQMSPN
FLLWLVLGVFFMATTLRMYATCQQLQAQAQAHAVAASGLLGPTELRLHMPPSIALATRGR
LRGLRLQLALLDREFDDLDYETLRALDNDDVPTTPSMTEEEINALPVHKYKVSGPQSAGS
STHPASSSGSIEKKQEPATAVGATKNPDDELTCSVCLEQVNAGELVRSLPCLHQFHANCI
DPWLRQRGTCPVCKFRAGWDENGQGEVDAYDMV

Transcript Sequence

Gene sequence data has not been registered.